==25572== Memcheck, a memory error detector ==25572== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25572== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25572== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==25572== Parent PID: 24218 ==25572== ==25572== ==25572== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25572== Open file descriptor 12: ==25572== at 0xED0C07D: pipe (pipe.c:29) ==25572== by 0x196B507D: ??? ==25572== by 0x13C064CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25572== by 0xE95B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25572== by 0xE8F4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25572== by 0xD5C8D38: PetscInitialize (pinit.c:924) ==25572== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25572== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25572== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25572== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25572== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25572== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25572== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25572== by 0x113935: main (TestCellSrn.cpp:18) ==25572== ==25572== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25572== at 0xED10A1C: __open_nocancel (open64_nocancel.c:39) ==25572== by 0xEC94BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25572== by 0xE852822: ??? ==25572== by 0xE85296F: ??? ==25572== by 0x13CAB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25572== by 0x13CAB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25572== by 0x13C61922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25572== by 0x13C062DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25572== by 0xE95B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25572== by 0xE8F4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25572== by 0xD5C8D38: PetscInitialize (pinit.c:924) ==25572== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25572== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25572== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25572== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25572== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25572== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25572== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25572== by 0x113935: main (TestCellSrn.cpp:18) ==25572== ==25572== Open file descriptor 113: ==25572== ==25572== ==25572== Open file descriptor 110: ==25572== ==25572== ==25572== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==25572== ==25572== ==25572== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25572== ==25572== ==25572== ==25572== HEAP SUMMARY: ==25572== in use at exit: 618,430 bytes in 8,240 blocks ==25572== total heap usage: 63,351 allocs, 55,111 frees, 1,339,390,092 bytes allocated ==25572== ==25572== LEAK SUMMARY: ==25572== definitely lost: 0 bytes in 0 blocks ==25572== indirectly lost: 0 bytes in 0 blocks ==25572== possibly lost: 0 bytes in 0 blocks ==25572== still reachable: 120 bytes in 4 blocks ==25572== suppressed: 618,310 bytes in 8,236 blocks ==25572== Reachable blocks (those to which a pointer was found) are not shown. ==25572== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25572== ==25572== For lists of detected and suppressed errors, rerun with: -s ==25572== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)