==25641== Memcheck, a memory error detector ==25641== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25641== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25641== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25641== Parent PID: 24218 ==25641== ==25641== ==25641== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25641== Open file descriptor 12: ==25641== at 0xF7FF07D: pipe (pipe.c:29) ==25641== by 0x196B507D: ??? ==25641== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25641== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25641== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25641== by 0x1012DD38: PetscInitialize (pinit.c:924) ==25641== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25641== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25641== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25641== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25641== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25641== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25641== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25641== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25641== ==25641== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25641== at 0xF803A1C: __open_nocancel (open64_nocancel.c:39) ==25641== by 0xF787BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25641== by 0xF137822: ??? ==25641== by 0xF13796F: ??? ==25641== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25641== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25641== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25641== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25641== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25641== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25641== by 0x1012DD38: PetscInitialize (pinit.c:924) ==25641== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25641== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25641== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25641== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25641== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25641== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25641== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25641== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25641== ==25641== Open file descriptor 113: ==25641== ==25641== ==25641== Open file descriptor 110: ==25641== ==25641== ==25641== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25641== ==25641== ==25641== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25641== ==25641== ==25641== ==25641== HEAP SUMMARY: ==25641== in use at exit: 618,430 bytes in 8,240 blocks ==25641== total heap usage: 69,419 allocs, 61,179 frees, 1,340,699,730 bytes allocated ==25641== ==25641== LEAK SUMMARY: ==25641== definitely lost: 0 bytes in 0 blocks ==25641== indirectly lost: 0 bytes in 0 blocks ==25641== possibly lost: 0 bytes in 0 blocks ==25641== still reachable: 120 bytes in 4 blocks ==25641== suppressed: 618,310 bytes in 8,236 blocks ==25641== Reachable blocks (those to which a pointer was found) are not shown. ==25641== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25641== ==25641== For lists of detected and suppressed errors, rerun with: -s ==25641== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)