==41835== Memcheck, a memory error detector ==41835== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41835== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41835== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41835== Parent PID: 24218 ==41835== ==41835== ==41835== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41835== Open file descriptor 12: ==41835== at 0x87AE07D: pipe (pipe.c:29) ==41835== by 0x1433007D: ??? ==41835== by 0xEE264CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41835== by 0x9EA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41835== by 0x9E42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41835== by 0x8B39D38: PetscInitialize (pinit.c:924) ==41835== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41835== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41835== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41835== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41835== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41835== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41835== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41835== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41835== ==41835== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41835== at 0x87B2A1C: __open_nocancel (open64_nocancel.c:39) ==41835== by 0x8736BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41835== by 0x8411822: ??? ==41835== by 0x841196F: ??? ==41835== by 0xEECD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41835== by 0xEECD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41835== by 0xEE83922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41835== by 0xEE262DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41835== by 0x9EA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41835== by 0x9E42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41835== by 0x8B39D38: PetscInitialize (pinit.c:924) ==41835== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41835== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41835== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41835== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41835== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41835== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41835== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41835== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41835== ==41835== Open file descriptor 113: ==41835== ==41835== ==41835== Open file descriptor 110: ==41835== ==41835== ==41835== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41835== ==41835== ==41835== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41835== ==41835== ==41835== ==41835== HEAP SUMMARY: ==41835== in use at exit: 621,884 bytes in 8,242 blocks ==41835== total heap usage: 3,054,221 allocs, 3,045,979 frees, 1,612,720,573 bytes allocated ==41835== ==41835== LEAK SUMMARY: ==41835== definitely lost: 0 bytes in 0 blocks ==41835== indirectly lost: 0 bytes in 0 blocks ==41835== possibly lost: 0 bytes in 0 blocks ==41835== still reachable: 3,629 bytes in 10 blocks ==41835== suppressed: 618,255 bytes in 8,232 blocks ==41835== Reachable blocks (those to which a pointer was found) are not shown. ==41835== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41835== ==41835== For lists of detected and suppressed errors, rerun with: -s ==41835== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)