==41937== Memcheck, a memory error detector ==41937== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41937== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41937== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41937== Parent PID: 24218 ==41937== ==41937== ==41937== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41937== Open file descriptor 12: ==41937== at 0x856C07D: pipe (pipe.c:29) ==41937== by 0x1433007D: ??? ==41937== by 0xEE264CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41937== by 0x9C67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41937== by 0x9C00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41937== by 0x88F7D38: PetscInitialize (pinit.c:924) ==41937== by 0x81981D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41937== by 0x8198227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41937== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41937== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41937== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41937== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41937== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41937== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41937== ==41937== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41937== at 0x8570A1C: __open_nocancel (open64_nocancel.c:39) ==41937== by 0x84F4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41937== by 0x81CD822: ??? ==41937== by 0x81CD96F: ??? ==41937== by 0xEECD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41937== by 0xEECD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41937== by 0xEE83922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41937== by 0xEE262DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41937== by 0x9C67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41937== by 0x9C00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41937== by 0x88F7D38: PetscInitialize (pinit.c:924) ==41937== by 0x81981D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41937== by 0x8198227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41937== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41937== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41937== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41937== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41937== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41937== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41937== ==41937== Open file descriptor 113: ==41937== ==41937== ==41937== Open file descriptor 110: ==41937== ==41937== ==41937== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41937== ==41937== ==41937== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41937== ==41937== ==41937== ==41937== HEAP SUMMARY: ==41937== in use at exit: 618,350 bytes in 8,238 blocks ==41937== total heap usage: 49,004 allocs, 40,766 frees, 1,338,535,323 bytes allocated ==41937== ==41937== LEAK SUMMARY: ==41937== definitely lost: 0 bytes in 0 blocks ==41937== indirectly lost: 0 bytes in 0 blocks ==41937== possibly lost: 0 bytes in 0 blocks ==41937== still reachable: 24 bytes in 2 blocks ==41937== suppressed: 618,326 bytes in 8,236 blocks ==41937== Reachable blocks (those to which a pointer was found) are not shown. ==41937== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41937== ==41937== For lists of detected and suppressed errors, rerun with: -s ==41937== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)