==25649== Memcheck, a memory error detector ==25649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25649== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25649== Parent PID: 24218 ==25649== ==25649== ==25649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25649== Open file descriptor 12: ==25649== at 0xED4E07D: pipe (pipe.c:29) ==25649== by 0x196B507D: ??? ==25649== by 0x13C064CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25649== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xD62DD38: PetscInitialize (pinit.c:924) ==25649== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25649== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25649== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25649== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25649== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25649== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25649== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25649== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25649== ==25649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25649== at 0xED52A1C: __open_nocancel (open64_nocancel.c:39) ==25649== by 0xECD6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25649== by 0xD4D2822: ??? ==25649== by 0xD4D296F: ??? ==25649== by 0x13CAB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13CAB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13C61922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13C062DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25649== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xD62DD38: PetscInitialize (pinit.c:924) ==25649== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25649== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25649== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25649== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25649== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25649== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25649== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25649== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25649== ==25649== Open file descriptor 113: ==25649== ==25649== ==25649== Open file descriptor 110: ==25649== ==25649== ==25649== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25649== ==25649== ==25649== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25649== ==25649== ==25649== ==25649== HEAP SUMMARY: ==25649== in use at exit: 618,382 bytes in 8,240 blocks ==25649== total heap usage: 57,246 allocs, 49,006 frees, 1,339,480,343 bytes allocated ==25649== ==25649== LEAK SUMMARY: ==25649== definitely lost: 0 bytes in 0 blocks ==25649== indirectly lost: 0 bytes in 0 blocks ==25649== possibly lost: 0 bytes in 0 blocks ==25649== still reachable: 72 bytes in 4 blocks ==25649== suppressed: 618,310 bytes in 8,236 blocks ==25649== Reachable blocks (those to which a pointer was found) are not shown. ==25649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25649== ==25649== For lists of detected and suppressed errors, rerun with: -s ==25649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)