==41102== Memcheck, a memory error detector ==41102== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41102== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41102== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==41102== Parent PID: 24235 ==41102== ==41102== ==41102== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41102== Open file descriptor 12: ==41102== at 0x1256E07D: pipe (pipe.c:29) ==41102== by 0x1B36E07D: ??? ==41102== by 0x164D24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41102== by 0x11E76418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41102== by 0x11E0FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41102== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==41102== by 0x109BA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41102== by 0x109BA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41102== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41102== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41102== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41102== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41102== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41102== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==41102== ==41102== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41102== at 0x12572A1C: __open_nocancel (open64_nocancel.c:39) ==41102== by 0x124F6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41102== by 0x11D6D822: ??? ==41102== by 0x11D6D96F: ??? ==41102== by 0x165776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41102== by 0x16577938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41102== by 0x1652D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41102== by 0x164D22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41102== by 0x11E76418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41102== by 0x11E0FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41102== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==41102== by 0x109BA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41102== by 0x109BA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41102== by 0x123E95: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41102== by 0x11F713: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41102== by 0x12197C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41102== by 0x121878: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41102== by 0x121E8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41102== by 0x11DF15: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==41102== ==41102== Open file descriptor 113: ==41102== ==41102== ==41102== Open file descriptor 110: ==41102== ==41102== ==41102== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==41102== ==41102== ==41102== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41102== ==41102== ==41102== ==41102== HEAP SUMMARY: ==41102== in use at exit: 618,311 bytes in 8,235 blocks ==41102== total heap usage: 16,186,046 allocs, 16,177,811 frees, 2,829,767,525 bytes allocated ==41102== ==41102== LEAK SUMMARY: ==41102== definitely lost: 0 bytes in 0 blocks ==41102== indirectly lost: 0 bytes in 0 blocks ==41102== possibly lost: 0 bytes in 0 blocks ==41102== still reachable: 56 bytes in 3 blocks ==41102== suppressed: 618,255 bytes in 8,232 blocks ==41102== Reachable blocks (those to which a pointer was found) are not shown. ==41102== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41102== ==41102== For lists of detected and suppressed errors, rerun with: -s ==41102== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)