==41206== Memcheck, a memory error detector ==41206== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41206== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41206== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41206== Parent PID: 24047 ==41206== ==41206== ==41206== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41206== Open file descriptor 12: ==41206== at 0xA98907D: pipe (pipe.c:29) ==41206== by 0x1432707D: ??? ==41206== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41206== by 0xA277418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41206== by 0xA210D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41206== by 0xAD14D38: PetscInitialize (pinit.c:924) ==41206== by 0xA1391D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41206== by 0xA139227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41206== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41206== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41206== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41206== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41206== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41206== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41206== ==41206== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41206== at 0xA98DA1C: __open_nocancel (open64_nocancel.c:39) ==41206== by 0xA911BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41206== by 0xA16E822: ??? ==41206== by 0xA16E96F: ??? ==41206== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41206== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41206== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41206== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41206== by 0xA277418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41206== by 0xA210D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41206== by 0xAD14D38: PetscInitialize (pinit.c:924) ==41206== by 0xA1391D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41206== by 0xA139227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41206== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41206== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41206== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41206== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41206== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41206== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41206== ==41206== Open file descriptor 113: ==41206== ==41206== ==41206== Open file descriptor 110: ==41206== ==41206== ==41206== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==41206== ==41206== ==41206== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41206== ==41206== ==41206== ==41206== HEAP SUMMARY: ==41206== in use at exit: 618,757 bytes in 8,244 blocks ==41206== total heap usage: 2,372,929 allocs, 2,364,685 frees, 2,468,286,128 bytes allocated ==41206== ==41206== LEAK SUMMARY: ==41206== definitely lost: 0 bytes in 0 blocks ==41206== indirectly lost: 0 bytes in 0 blocks ==41206== possibly lost: 0 bytes in 0 blocks ==41206== still reachable: 24 bytes in 2 blocks ==41206== suppressed: 618,733 bytes in 8,242 blocks ==41206== Reachable blocks (those to which a pointer was found) are not shown. ==41206== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41206== ==41206== For lists of detected and suppressed errors, rerun with: -s ==41206== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)