==43539== Memcheck, a memory error detector ==43539== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43539== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43539== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43539== Parent PID: 24075 ==43539== ==43539== ==43539== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43539== Open file descriptor 12: ==43539== at 0x892407D: pipe (pipe.c:29) ==43539== by 0x1432807D: ??? ==43539== by 0xEE6D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43539== by 0xA01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43539== by 0x9FB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43539== by 0x8CAFD38: PetscInitialize (pinit.c:924) ==43539== by 0x820D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43539== by 0x820D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43539== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43539== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43539== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43539== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43539== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43539== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43539== ==43539== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43539== at 0x8928A1C: __open_nocancel (open64_nocancel.c:39) ==43539== by 0x88ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43539== by 0x8242822: ??? ==43539== by 0x824296F: ??? ==43539== by 0xEF126DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43539== by 0xEF12938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43539== by 0xEEC8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43539== by 0xEE6D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43539== by 0xA01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43539== by 0x9FB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43539== by 0x8CAFD38: PetscInitialize (pinit.c:924) ==43539== by 0x820D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43539== by 0x820D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43539== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43539== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43539== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43539== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43539== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43539== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43539== ==43539== Open file descriptor 113: ==43539== ==43539== ==43539== Open file descriptor 110: ==43539== ==43539== ==43539== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43539== ==43539== ==43539== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43539== ==43539== ==43539== ==43539== HEAP SUMMARY: ==43539== in use at exit: 625,893 bytes in 8,260 blocks ==43539== total heap usage: 4,756,895 allocs, 4,748,635 frees, 2,828,621,566 bytes allocated ==43539== ==43539== LEAK SUMMARY: ==43539== definitely lost: 0 bytes in 0 blocks ==43539== indirectly lost: 0 bytes in 0 blocks ==43539== possibly lost: 0 bytes in 0 blocks ==43539== still reachable: 7,156 bytes in 18 blocks ==43539== suppressed: 618,737 bytes in 8,242 blocks ==43539== Reachable blocks (those to which a pointer was found) are not shown. ==43539== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43539== ==43539== For lists of detected and suppressed errors, rerun with: -s ==43539== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 231 from 34)