==41187== Memcheck, a memory error detector ==41187== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41187== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41187== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41187== Parent PID: 24059 ==41187== ==41187== ==41187== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41187== Open file descriptor 12: ==41187== at 0xC0E807D: pipe (pipe.c:29) ==41187== by 0x1432707D: ??? ==41187== by 0xFADE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41187== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41187== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41187== by 0xA666D38: PetscInitialize (pinit.c:924) ==41187== by 0xA4D61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41187== by 0xA4D6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41187== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41187== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41187== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41187== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41187== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41187== by 0x138285: main (TestBidomainProblem.cpp:19) ==41187== ==41187== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41187== at 0xC0ECA1C: __open_nocancel (open64_nocancel.c:39) ==41187== by 0xC070BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41187== by 0xA50B822: ??? ==41187== by 0xA50B96F: ??? ==41187== by 0xFB836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41187== by 0xFB83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41187== by 0xFB39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41187== by 0xFADE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41187== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41187== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41187== by 0xA666D38: PetscInitialize (pinit.c:924) ==41187== by 0xA4D61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41187== by 0xA4D6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41187== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41187== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41187== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41187== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41187== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41187== by 0x138285: main (TestBidomainProblem.cpp:19) ==41187== ==41187== Open file descriptor 113: ==41187== ==41187== ==41187== Open file descriptor 110: ==41187== ==41187== ==41187== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41187== ==41187== ==41187== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41187== ==41187== ==41187== ==41187== HEAP SUMMARY: ==41187== in use at exit: 618,830 bytes in 8,248 blocks ==41187== total heap usage: 584,918 allocs, 576,670 frees, 1,548,984,076 bytes allocated ==41187== ==41187== LEAK SUMMARY: ==41187== definitely lost: 0 bytes in 0 blocks ==41187== indirectly lost: 0 bytes in 0 blocks ==41187== possibly lost: 0 bytes in 0 blocks ==41187== still reachable: 24 bytes in 2 blocks ==41187== suppressed: 618,806 bytes in 8,246 blocks ==41187== Reachable blocks (those to which a pointer was found) are not shown. ==41187== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41187== ==41187== For lists of detected and suppressed errors, rerun with: -s ==41187== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)