==26008== Memcheck, a memory error detector ==26008== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26008== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26008== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDiscreteSystemForceCalculator -malloc_debug -malloc_dump -memory_info ==26008== Parent PID: 24030 ==26008== ==26008== ==26008== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26008== Open file descriptor 12: ==26008== at 0x10CAE07D: pipe (pipe.c:29) ==26008== by 0x196AE07D: ??? ==26008== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26008== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26008== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26008== by 0xF223D38: PetscInitialize (pinit.c:924) ==26008== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26008== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26008== by 0x12A32F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26008== by 0x123F2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26008== by 0x1269BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26008== by 0x12685E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26008== by 0x126EF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26008== by 0x122355: main (TestDiscreteSystemForceCalculator.cpp:19) ==26008== ==26008== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26008== at 0x10CB2A1C: __open_nocancel (open64_nocancel.c:39) ==26008== by 0x10C36BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26008== by 0x104AD822: ??? ==26008== by 0x104AD96F: ??? ==26008== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26008== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26008== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26008== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26008== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26008== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26008== by 0xF223D38: PetscInitialize (pinit.c:924) ==26008== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26008== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26008== by 0x12A32F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26008== by 0x123F2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26008== by 0x1269BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26008== by 0x12685E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26008== by 0x126EF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26008== by 0x122355: main (TestDiscreteSystemForceCalculator.cpp:19) ==26008== ==26008== Open file descriptor 113: ==26008== ==26008== ==26008== Open file descriptor 110: ==26008== ==26008== ==26008== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDiscreteSystemForceCalculator_valgrind.txt ==26008== ==26008== ==26008== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26008== ==26008== ==26008== ==26008== HEAP SUMMARY: ==26008== in use at exit: 618,362 bytes in 8,239 blocks ==26008== total heap usage: 123,057 allocs, 114,818 frees, 1,345,486,431 bytes allocated ==26008== ==26008== LEAK SUMMARY: ==26008== definitely lost: 0 bytes in 0 blocks ==26008== indirectly lost: 0 bytes in 0 blocks ==26008== possibly lost: 0 bytes in 0 blocks ==26008== still reachable: 56 bytes in 3 blocks ==26008== suppressed: 618,306 bytes in 8,236 blocks ==26008== Reachable blocks (those to which a pointer was found) are not shown. ==26008== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26008== ==26008== For lists of detected and suppressed errors, rerun with: -s ==26008== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)