==41487== Memcheck, a memory error detector ==41487== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41487== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41487== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==41487== Parent PID: 24032 ==41487== ==41487== ==41487== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41487== Open file descriptor 12: ==41487== at 0x9C6507D: pipe (pipe.c:29) ==41487== by 0x1432707D: ??? ==41487== by 0xEE1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41487== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x8505D38: PetscInitialize (pinit.c:924) ==41487== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41487== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41487== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41487== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41487== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41487== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41487== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41487== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41487== ==41487== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41487== at 0x9C69A1C: __open_nocancel (open64_nocancel.c:39) ==41487== by 0x9BEDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41487== by 0x978F822: ??? ==41487== by 0x978F96F: ??? ==41487== by 0xEEC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0xEEC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0xEE7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41487== by 0xEE1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41487== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41487== by 0x8505D38: PetscInitialize (pinit.c:924) ==41487== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41487== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41487== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41487== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41487== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41487== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41487== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41487== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41487== ==41487== Open file descriptor 113: ==41487== ==41487== ==41487== Open file descriptor 110: ==41487== ==41487== ==41487== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==41487== ==41487== ==41487== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41487== ==41487== ==41487== ==41487== HEAP SUMMARY: ==41487== in use at exit: 618,277 bytes in 8,234 blocks ==41487== total heap usage: 74,028 allocs, 65,794 frees, 1,342,640,421 bytes allocated ==41487== ==41487== LEAK SUMMARY: ==41487== definitely lost: 0 bytes in 0 blocks ==41487== indirectly lost: 0 bytes in 0 blocks ==41487== possibly lost: 0 bytes in 0 blocks ==41487== still reachable: 24 bytes in 2 blocks ==41487== suppressed: 618,253 bytes in 8,232 blocks ==41487== Reachable blocks (those to which a pointer was found) are not shown. ==41487== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41487== ==41487== For lists of detected and suppressed errors, rerun with: -s ==41487== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)