==26302== Memcheck, a memory error detector ==26302== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26302== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26302== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==26302== Parent PID: 24032 ==26302== ==26302== ==26302== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26302== Open file descriptor 12: ==26302== at 0xF8DE07D: pipe (pipe.c:29) ==26302== by 0x196AE07D: ??? ==26302== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26302== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26302== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26302== by 0x1020ED38: PetscInitialize (pinit.c:924) ==26302== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26302== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26302== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26302== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26302== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26302== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26302== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26302== by 0x133475: main (TestNumericalMethods.cpp:19) ==26302== ==26302== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26302== at 0xF8E2A1C: __open_nocancel (open64_nocancel.c:39) ==26302== by 0xF866BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26302== by 0xF12F822: ??? ==26302== by 0xF12F96F: ??? ==26302== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26302== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26302== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26302== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26302== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26302== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26302== by 0x1020ED38: PetscInitialize (pinit.c:924) ==26302== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26302== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26302== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26302== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26302== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26302== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26302== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26302== by 0x133475: main (TestNumericalMethods.cpp:19) ==26302== ==26302== Open file descriptor 113: ==26302== ==26302== ==26302== Open file descriptor 110: ==26302== ==26302== ==26302== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==26302== ==26302== ==26302== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26302== ==26302== ==26302== ==26302== HEAP SUMMARY: ==26302== in use at exit: 618,362 bytes in 8,239 blocks ==26302== total heap usage: 69,187 allocs, 60,948 frees, 1,341,833,060 bytes allocated ==26302== ==26302== LEAK SUMMARY: ==26302== definitely lost: 0 bytes in 0 blocks ==26302== indirectly lost: 0 bytes in 0 blocks ==26302== possibly lost: 0 bytes in 0 blocks ==26302== still reachable: 56 bytes in 3 blocks ==26302== suppressed: 618,306 bytes in 8,236 blocks ==26302== Reachable blocks (those to which a pointer was found) are not shown. ==26302== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26302== ==26302== For lists of detected and suppressed errors, rerun with: -s ==26302== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)