==25129== Memcheck, a memory error detector ==25129== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25129== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25129== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25129== Parent PID: 23934 ==25129== ==25129== ==25129== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25129== Open file descriptor 12: ==25129== at 0x734D07D: pipe (pipe.c:29) ==25129== by 0x104E107D: ??? ==25129== by 0xC6124CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25129== by 0x8DC1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25129== by 0x8D5AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25129== by 0x769CD38: PetscInitialize (pinit.c:924) ==25129== by 0x68FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25129== by 0x68FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25129== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25129== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25129== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25129== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25129== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25129== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25129== ==25129== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25129== at 0x7351A1C: __open_nocancel (open64_nocancel.c:39) ==25129== by 0x72D5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25129== by 0x6931822: ??? ==25129== by 0x693196F: ??? ==25129== by 0xC6B76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25129== by 0xC6B7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25129== by 0xC66D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25129== by 0xC6122DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25129== by 0x8DC1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25129== by 0x8D5AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25129== by 0x769CD38: PetscInitialize (pinit.c:924) ==25129== by 0x68FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25129== by 0x68FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25129== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25129== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25129== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25129== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25129== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25129== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25129== ==25129== Open file descriptor 113: ==25129== ==25129== ==25129== Open file descriptor 110: ==25129== ==25129== ==25129== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25129== ==25129== ==25129== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25129== ==25129== ==25129== ==25129== HEAP SUMMARY: ==25129== in use at exit: 618,274 bytes in 8,238 blocks ==25129== total heap usage: 206,013 allocs, 197,775 frees, 1,394,471,799 bytes allocated ==25129== ==25129== LEAK SUMMARY: ==25129== definitely lost: 0 bytes in 0 blocks ==25129== indirectly lost: 0 bytes in 0 blocks ==25129== possibly lost: 0 bytes in 0 blocks ==25129== still reachable: 24 bytes in 2 blocks ==25129== suppressed: 618,250 bytes in 8,236 blocks ==25129== Reachable blocks (those to which a pointer was found) are not shown. ==25129== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25129== ==25129== For lists of detected and suppressed errors, rerun with: -s ==25129== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)