==26552== Memcheck, a memory error detector ==26552== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26552== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26552== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26552== Parent PID: 23934 ==26552== ==26552== ==26552== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26552== Open file descriptor 12: ==26552== at 0xF92A07D: pipe (pipe.c:29) ==26552== by 0x196B507D: ??? ==26552== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26552== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26552== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26552== by 0x10216D38: PetscInitialize (pinit.c:924) ==26552== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26552== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26552== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26552== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26552== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26552== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26552== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26552== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26552== ==26552== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26552== at 0xF92EA1C: __open_nocancel (open64_nocancel.c:39) ==26552== by 0xF8B2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26552== by 0xF137822: ??? ==26552== by 0xF13796F: ??? ==26552== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26552== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26552== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26552== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26552== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26552== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26552== by 0x10216D38: PetscInitialize (pinit.c:924) ==26552== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26552== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26552== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26552== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26552== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26552== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26552== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26552== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26552== ==26552== Open file descriptor 113: ==26552== ==26552== ==26552== Open file descriptor 110: ==26552== ==26552== ==26552== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26552== ==26552== ==26552== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26552== ==26552== ==26552== ==26552== HEAP SUMMARY: ==26552== in use at exit: 618,329 bytes in 8,236 blocks ==26552== total heap usage: 18,258,674 allocs, 18,250,438 frees, 30,027,857,470 bytes allocated ==26552== ==26552== LEAK SUMMARY: ==26552== definitely lost: 0 bytes in 0 blocks ==26552== indirectly lost: 0 bytes in 0 blocks ==26552== possibly lost: 0 bytes in 0 blocks ==26552== still reachable: 88 bytes in 4 blocks ==26552== suppressed: 618,241 bytes in 8,232 blocks ==26552== Reachable blocks (those to which a pointer was found) are not shown. ==26552== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26552== ==26552== For lists of detected and suppressed errors, rerun with: -s ==26552== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)