==25760== Memcheck, a memory error detector ==25760== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25760== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25760== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMeshReader -malloc_debug -malloc_dump -memory_info ==25760== Parent PID: 23934 ==25760== ==25760== ==25760== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25760== Open file descriptor 12: ==25760== at 0xF4BA07D: pipe (pipe.c:29) ==25760== by 0x196B507D: ??? ==25760== by 0x14C6F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25760== by 0x11158418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x110F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0xFDE8D38: PetscInitialize (pinit.c:924) ==25760== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25760== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25760== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25760== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25760== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25760== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25760== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25760== by 0x112935: main (TestPottsMeshReader.cpp:19) ==25760== ==25760== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25760== at 0xF4BEA1C: __open_nocancel (open64_nocancel.c:39) ==25760== by 0xF442BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25760== by 0xF137822: ??? ==25760== by 0xF13796F: ??? ==25760== by 0x14D146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14D14938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14CCA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14C6F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25760== by 0x11158418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x110F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0xFDE8D38: PetscInitialize (pinit.c:924) ==25760== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25760== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25760== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25760== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25760== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25760== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25760== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25760== by 0x112935: main (TestPottsMeshReader.cpp:19) ==25760== ==25760== Open file descriptor 113: ==25760== ==25760== ==25760== Open file descriptor 110: ==25760== ==25760== ==25760== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMeshReader_valgrind.txt ==25760== ==25760== ==25760== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25760== ==25760== ==25760== ==25760== HEAP SUMMARY: ==25760== in use at exit: 618,338 bytes in 8,238 blocks ==25760== total heap usage: 53,377 allocs, 45,139 frees, 1,339,154,222 bytes allocated ==25760== ==25760== LEAK SUMMARY: ==25760== definitely lost: 0 bytes in 0 blocks ==25760== indirectly lost: 0 bytes in 0 blocks ==25760== possibly lost: 0 bytes in 0 blocks ==25760== still reachable: 24 bytes in 2 blocks ==25760== suppressed: 618,314 bytes in 8,236 blocks ==25760== Reachable blocks (those to which a pointer was found) are not shown. ==25760== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25760== ==25760== For lists of detected and suppressed errors, rerun with: -s ==25760== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)