==40206== Memcheck, a memory error detector ==40206== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40206== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40206== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==40206== Parent PID: 23976 ==40206== ==40206== ==40206== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40206== Open file descriptor 12: ==40206== at 0x1095507D: pipe (pipe.c:29) ==40206== by 0x1B37707D: ??? ==40206== by 0x154C64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40206== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40206== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40206== by 0xEEEDD38: PetscInitialize (pinit.c:924) ==40206== by 0xED5F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40206== by 0xED5F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40206== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40206== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40206== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40206== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40206== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40206== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40206== ==40206== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40206== at 0x10959A1C: __open_nocancel (open64_nocancel.c:39) ==40206== by 0x108DDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40206== by 0xED94822: ??? ==40206== by 0xED9496F: ??? ==40206== by 0x1556B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40206== by 0x1556B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40206== by 0x15521922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40206== by 0x154C62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40206== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40206== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40206== by 0xEEEDD38: PetscInitialize (pinit.c:924) ==40206== by 0xED5F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40206== by 0xED5F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40206== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40206== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40206== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40206== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40206== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40206== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40206== ==40206== Open file descriptor 113: ==40206== ==40206== ==40206== Open file descriptor 110: ==40206== ==40206== ==40206== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==40206== ==40206== ==40206== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40206== ==40206== ==40206== ==40206== HEAP SUMMARY: ==40206== in use at exit: 618,446 bytes in 8,240 blocks ==40206== total heap usage: 753,781 allocs, 745,541 frees, 1,372,608,745 bytes allocated ==40206== ==40206== LEAK SUMMARY: ==40206== definitely lost: 0 bytes in 0 blocks ==40206== indirectly lost: 0 bytes in 0 blocks ==40206== possibly lost: 0 bytes in 0 blocks ==40206== still reachable: 120 bytes in 4 blocks ==40206== suppressed: 618,326 bytes in 8,236 blocks ==40206== Reachable blocks (those to which a pointer was found) are not shown. ==40206== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40206== ==40206== For lists of detected and suppressed errors, rerun with: -s ==40206== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)