==40149== Memcheck, a memory error detector ==40149== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40149== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40149== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVisualizingWithParaviewTutorial -malloc_debug -malloc_dump -memory_info ==40149== Parent PID: 23976 ==40149== ==40149== ==40149== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40149== Open file descriptor 12: ==40149== at 0x10CB607D: pipe (pipe.c:29) ==40149== by 0x196B607D: ??? ==40149== by 0x14C194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40149== by 0x105BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40149== by 0x10557D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40149== by 0xF22BD38: PetscInitialize (pinit.c:924) ==40149== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40149== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40149== by 0x124111: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40149== by 0x11F773: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40149== by 0x121C86: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40149== by 0x121B81: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40149== by 0x122195: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40149== by 0x11DF75: main (TestVisualizingWithParaviewTutorial.cpp:18) ==40149== ==40149== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40149== at 0x10CBAA1C: __open_nocancel (open64_nocancel.c:39) ==40149== by 0x10C3EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40149== by 0x104B5822: ??? ==40149== by 0x104B596F: ??? ==40149== by 0x14CBE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40149== by 0x14CBE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40149== by 0x14C74922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40149== by 0x14C192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40149== by 0x105BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40149== by 0x10557D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40149== by 0xF22BD38: PetscInitialize (pinit.c:924) ==40149== by 0xF1021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40149== by 0xF102227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40149== by 0x124111: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40149== by 0x11F773: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40149== by 0x121C86: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40149== by 0x121B81: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40149== by 0x122195: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40149== by 0x11DF75: main (TestVisualizingWithParaviewTutorial.cpp:18) ==40149== ==40149== Open file descriptor 113: ==40149== ==40149== ==40149== Open file descriptor 110: ==40149== ==40149== ==40149== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVisualizingWithParaviewTutorial_valgrind.txt ==40149== ==40149== ==40149== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40149== ==40149== ==40149== ==40149== HEAP SUMMARY: ==40149== in use at exit: 618,295 bytes in 8,235 blocks ==40149== total heap usage: 11,883,211 allocs, 11,874,976 frees, 2,667,675,600 bytes allocated ==40149== ==40149== LEAK SUMMARY: ==40149== definitely lost: 0 bytes in 0 blocks ==40149== indirectly lost: 0 bytes in 0 blocks ==40149== possibly lost: 0 bytes in 0 blocks ==40149== still reachable: 56 bytes in 3 blocks ==40149== suppressed: 618,239 bytes in 8,232 blocks ==40149== Reachable blocks (those to which a pointer was found) are not shown. ==40149== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40149== ==40149== For lists of detected and suppressed errors, rerun with: -s ==40149== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)