==25999== Memcheck, a memory error detector ==25999== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25999== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25999== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestForces -malloc_debug -malloc_dump -memory_info ==25999== Parent PID: 24005 ==25999== ==25999== ==25999== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25999== Open file descriptor 12: ==25999== at 0xF92207D: pipe (pipe.c:29) ==25999== by 0x196AB07D: ??? ==25999== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25999== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25999== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25999== by 0x1020ED38: PetscInitialize (pinit.c:924) ==25999== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25999== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25999== by 0x14FA72: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25999== by 0x147FBD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25999== by 0x14B1C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25999== by 0x14B060: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25999== by 0x14B6F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25999== by 0x1463E5: main (TestForces.cpp:19) ==25999== ==25999== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25999== at 0xF926A1C: __open_nocancel (open64_nocancel.c:39) ==25999== by 0xF8AABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25999== by 0xF134822: ??? ==25999== by 0xF13496F: ??? ==25999== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25999== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25999== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25999== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25999== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25999== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25999== by 0x1020ED38: PetscInitialize (pinit.c:924) ==25999== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25999== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25999== by 0x14FA72: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25999== by 0x147FBD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25999== by 0x14B1C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25999== by 0x14B060: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25999== by 0x14B6F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25999== by 0x1463E5: main (TestForces.cpp:19) ==25999== ==25999== Open file descriptor 113: ==25999== ==25999== ==25999== Open file descriptor 110: ==25999== ==25999== ==25999== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestForces_valgrind.txt ==25999== ==25999== ==25999== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25999== ==25999== ==25999== ==25999== HEAP SUMMARY: ==25999== in use at exit: 618,366 bytes in 8,239 blocks ==25999== total heap usage: 100,085 allocs, 91,846 frees, 1,344,048,974 bytes allocated ==25999== ==25999== LEAK SUMMARY: ==25999== definitely lost: 0 bytes in 0 blocks ==25999== indirectly lost: 0 bytes in 0 blocks ==25999== possibly lost: 0 bytes in 0 blocks ==25999== still reachable: 56 bytes in 3 blocks ==25999== suppressed: 618,310 bytes in 8,236 blocks ==25999== Reachable blocks (those to which a pointer was found) are not shown. ==25999== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25999== ==25999== For lists of detected and suppressed errors, rerun with: -s ==25999== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)