==41162== Memcheck, a memory error detector ==41162== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41162== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41162== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==41162== Parent PID: 24011 ==41162== ==41162== ==41162== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41162== Open file descriptor 12: ==41162== at 0xAC6307D: pipe (pipe.c:29) ==41162== by 0x1432407D: ??? ==41162== by 0xFB2B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41162== by 0xC35E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41162== by 0xC2F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41162== by 0xAFEED38: PetscInitialize (pinit.c:924) ==41162== by 0xA4631D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41162== by 0xA463227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41162== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41162== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41162== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41162== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41162== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41162== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41162== ==41162== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41162== at 0xAC67A1C: __open_nocancel (open64_nocancel.c:39) ==41162== by 0xABEBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41162== by 0xA49D822: ??? ==41162== by 0xA49D96F: ??? ==41162== by 0xFBD06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41162== by 0xFBD0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41162== by 0xFB86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41162== by 0xFB2B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41162== by 0xC35E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41162== by 0xC2F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41162== by 0xAFEED38: PetscInitialize (pinit.c:924) ==41162== by 0xA4631D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41162== by 0xA463227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41162== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41162== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41162== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41162== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41162== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41162== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41162== ==41162== Open file descriptor 116: ==41162== ==41162== ==41162== Open file descriptor 113: ==41162== ==41162== ==41162== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==41162== ==41162== ==41162== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41162== ==41162== ==41162== ==41162== HEAP SUMMARY: ==41162== in use at exit: 618,759 bytes in 8,244 blocks ==41162== total heap usage: 1,394,263 allocs, 1,386,019 frees, 1,987,571,066 bytes allocated ==41162== ==41162== LEAK SUMMARY: ==41162== definitely lost: 0 bytes in 0 blocks ==41162== indirectly lost: 0 bytes in 0 blocks ==41162== possibly lost: 0 bytes in 0 blocks ==41162== still reachable: 24 bytes in 2 blocks ==41162== suppressed: 618,735 bytes in 8,242 blocks ==41162== Reachable blocks (those to which a pointer was found) are not shown. ==41162== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41162== ==41162== For lists of detected and suppressed errors, rerun with: -s ==41162== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 34)