==25441== Memcheck, a memory error detector ==25441== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25441== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25441== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25441== Parent PID: 24046 ==25441== ==25441== ==25441== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25441== Open file descriptor 12: ==25441== at 0xEF9207D: pipe (pipe.c:29) ==25441== by 0x196AA07D: ??? ==25441== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25441== by 0xEBDF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xEB78D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xD86FD38: PetscInitialize (pinit.c:924) ==25441== by 0xD6E11D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25441== by 0xD6E1227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25441== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25441== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25441== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25441== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25441== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25441== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25441== ==25441== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25441== at 0xEF96A1C: __open_nocancel (open64_nocancel.c:39) ==25441== by 0xEF1ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25441== by 0xD71B822: ??? ==25441== by 0xD71B96F: ??? ==25441== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25441== by 0xEBDF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xEB78D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xD86FD38: PetscInitialize (pinit.c:924) ==25441== by 0xD6E11D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25441== by 0xD6E1227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25441== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25441== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25441== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25441== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25441== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25441== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25441== ==25441== Open file descriptor 116: ==25441== ==25441== ==25441== Open file descriptor 113: ==25441== ==25441== ==25441== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25441== ==25441== ==25441== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25441== ==25441== ==25441== ==25441== HEAP SUMMARY: ==25441== in use at exit: 618,370 bytes in 8,239 blocks ==25441== total heap usage: 547,399 allocs, 539,160 frees, 1,344,758,645 bytes allocated ==25441== ==25441== LEAK SUMMARY: ==25441== definitely lost: 0 bytes in 0 blocks ==25441== indirectly lost: 0 bytes in 0 blocks ==25441== possibly lost: 0 bytes in 0 blocks ==25441== still reachable: 56 bytes in 3 blocks ==25441== suppressed: 618,314 bytes in 8,236 blocks ==25441== Reachable blocks (those to which a pointer was found) are not shown. ==25441== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25441== ==25441== For lists of detected and suppressed errors, rerun with: -s ==25441== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)