==25563== Memcheck, a memory error detector ==25563== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25563== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25563== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25563== Parent PID: 24046 ==25563== ==25563== ==25563== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25563== Open file descriptor 12: ==25563== at 0x1108D07D: pipe (pipe.c:29) ==25563== by 0x196AA07D: ??? ==25563== by 0x14C164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25563== by 0x10995418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0x1092ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xF625D38: PetscInitialize (pinit.c:924) ==25563== by 0xF4971D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25563== by 0xF497227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25563== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25563== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25563== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25563== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25563== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25563== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25563== ==25563== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25563== at 0x11091A1C: __open_nocancel (open64_nocancel.c:39) ==25563== by 0x11015BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25563== by 0xF4D1822: ??? ==25563== by 0xF4D196F: ??? ==25563== by 0x14CBB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x14CBB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x14C71922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x14C162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25563== by 0x10995418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0x1092ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xF625D38: PetscInitialize (pinit.c:924) ==25563== by 0xF4971D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25563== by 0xF497227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25563== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25563== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25563== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25563== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25563== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25563== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25563== ==25563== Open file descriptor 116: ==25563== ==25563== ==25563== Open file descriptor 113: ==25563== ==25563== ==25563== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25563== ==25563== ==25563== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25563== ==25563== ==25563== ==25563== HEAP SUMMARY: ==25563== in use at exit: 618,297 bytes in 8,235 blocks ==25563== total heap usage: 4,550,114 allocs, 4,541,879 frees, 1,904,492,625 bytes allocated ==25563== ==25563== LEAK SUMMARY: ==25563== definitely lost: 0 bytes in 0 blocks ==25563== indirectly lost: 0 bytes in 0 blocks ==25563== possibly lost: 0 bytes in 0 blocks ==25563== still reachable: 56 bytes in 3 blocks ==25563== suppressed: 618,241 bytes in 8,232 blocks ==25563== Reachable blocks (those to which a pointer was found) are not shown. ==25563== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25563== ==25563== For lists of detected and suppressed errors, rerun with: -s ==25563== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)