==41195== Memcheck, a memory error detector ==41195== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41195== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41195== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41195== Parent PID: 24065 ==41195== ==41195== ==41195== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41195== Open file descriptor 12: ==41195== at 0xC0E807D: pipe (pipe.c:29) ==41195== by 0x1432407D: ??? ==41195== by 0xFADE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41195== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41195== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41195== by 0xA666D38: PetscInitialize (pinit.c:924) ==41195== by 0xA4D61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41195== by 0xA4D6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41195== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41195== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41195== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41195== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41195== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41195== by 0x138285: main (TestBidomainProblem.cpp:19) ==41195== ==41195== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41195== at 0xC0ECA1C: __open_nocancel (open64_nocancel.c:39) ==41195== by 0xC070BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41195== by 0xA510822: ??? ==41195== by 0xA51096F: ??? ==41195== by 0xFB836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41195== by 0xFB83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41195== by 0xFB39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41195== by 0xFADE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41195== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41195== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41195== by 0xA666D38: PetscInitialize (pinit.c:924) ==41195== by 0xA4D61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41195== by 0xA4D6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41195== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41195== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41195== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41195== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41195== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41195== by 0x138285: main (TestBidomainProblem.cpp:19) ==41195== ==41195== Open file descriptor 116: ==41195== ==41195== ==41195== Open file descriptor 113: ==41195== ==41195== ==41195== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41195== ==41195== ==41195== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41195== ==41195== ==41195== ==41195== HEAP SUMMARY: ==41195== in use at exit: 618,834 bytes in 8,248 blocks ==41195== total heap usage: 584,916 allocs, 576,668 frees, 1,548,983,088 bytes allocated ==41195== ==41195== LEAK SUMMARY: ==41195== definitely lost: 0 bytes in 0 blocks ==41195== indirectly lost: 0 bytes in 0 blocks ==41195== possibly lost: 0 bytes in 0 blocks ==41195== still reachable: 24 bytes in 2 blocks ==41195== suppressed: 618,810 bytes in 8,246 blocks ==41195== Reachable blocks (those to which a pointer was found) are not shown. ==41195== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41195== ==41195== For lists of detected and suppressed errors, rerun with: -s ==41195== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)