==40412== Memcheck, a memory error detector ==40412== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40412== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40412== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==40412== Parent PID: 24065 ==40412== ==40412== ==40412== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40412== Open file descriptor 12: ==40412== at 0x110FB07D: pipe (pipe.c:29) ==40412== by 0x1B36D07D: ??? ==40412== by 0x165704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40412== by 0x12E3E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40412== by 0x12DD7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40412== by 0x11ACED38: PetscInitialize (pinit.c:924) ==40412== by 0x109BA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40412== by 0x109BA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40412== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40412== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40412== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40412== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40412== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40412== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40412== ==40412== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40412== at 0x110FFA1C: __open_nocancel (open64_nocancel.c:39) ==40412== by 0x11083BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40412== by 0x109F4822: ??? ==40412== by 0x109F496F: ??? ==40412== by 0x166156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40412== by 0x16615938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40412== by 0x165CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40412== by 0x165702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40412== by 0x12E3E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40412== by 0x12DD7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40412== by 0x11ACED38: PetscInitialize (pinit.c:924) ==40412== by 0x109BA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40412== by 0x109BA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40412== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40412== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40412== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40412== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40412== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40412== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40412== ==40412== Open file descriptor 116: ==40412== ==40412== ==40412== Open file descriptor 113: ==40412== ==40412== ==40412== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==40412== ==40412== ==40412== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40412== ==40412== ==40412== ==40412== HEAP SUMMARY: ==40412== in use at exit: 618,466 bytes in 8,240 blocks ==40412== total heap usage: 63,269 allocs, 55,029 frees, 1,341,083,575 bytes allocated ==40412== ==40412== LEAK SUMMARY: ==40412== definitely lost: 0 bytes in 0 blocks ==40412== indirectly lost: 0 bytes in 0 blocks ==40412== possibly lost: 0 bytes in 0 blocks ==40412== still reachable: 136 bytes in 4 blocks ==40412== suppressed: 618,330 bytes in 8,236 blocks ==40412== Reachable blocks (those to which a pointer was found) are not shown. ==40412== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40412== ==40412== For lists of detected and suppressed errors, rerun with: -s ==40412== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)