==25919== Memcheck, a memory error detector ==25919== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25919== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25919== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==25919== Parent PID: 24035 ==25919== ==25919== ==25919== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25919== Open file descriptor 12: ==25919== at 0x10DD707D: pipe (pipe.c:29) ==25919== by 0x196AB07D: ??? ==25919== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25919== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25919== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25919== by 0xF288D38: PetscInitialize (pinit.c:924) ==25919== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25919== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25919== by 0x1A5341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25919== by 0x19D239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25919== by 0x1A087C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25919== by 0x1A071C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25919== by 0x1A0DB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25919== by 0x19B655: main (TestCellKillers.cpp:19) ==25919== ==25919== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25919== at 0x10DDBA1C: __open_nocancel (open64_nocancel.c:39) ==25919== by 0x10D5FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25919== by 0xF134822: ??? ==25919== by 0xF13496F: ??? ==25919== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25919== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25919== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25919== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25919== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25919== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25919== by 0xF288D38: PetscInitialize (pinit.c:924) ==25919== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25919== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25919== by 0x1A5341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25919== by 0x19D239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25919== by 0x1A087C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25919== by 0x1A071C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25919== by 0x1A0DB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25919== by 0x19B655: main (TestCellKillers.cpp:19) ==25919== ==25919== Open file descriptor 114: ==25919== ==25919== ==25919== Open file descriptor 111: ==25919== ==25919== ==25919== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==25919== ==25919== ==25919== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25919== ==25919== ==25919== ==25919== HEAP SUMMARY: ==25919== in use at exit: 618,366 bytes in 8,239 blocks ==25919== total heap usage: 119,759 allocs, 111,520 frees, 1,344,138,353 bytes allocated ==25919== ==25919== LEAK SUMMARY: ==25919== definitely lost: 0 bytes in 0 blocks ==25919== indirectly lost: 0 bytes in 0 blocks ==25919== possibly lost: 0 bytes in 0 blocks ==25919== still reachable: 56 bytes in 3 blocks ==25919== suppressed: 618,310 bytes in 8,236 blocks ==25919== Reachable blocks (those to which a pointer was found) are not shown. ==25919== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25919== ==25919== For lists of detected and suppressed errors, rerun with: -s ==25919== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)