==39696== Memcheck, a memory error detector ==39696== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39696== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39696== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==39696== Parent PID: 24035 ==39696== ==39696== ==39696== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39696== Open file descriptor 12: ==39696== at 0x10CF007D: pipe (pipe.c:29) ==39696== by 0x196AB07D: ??? ==39696== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39696== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39696== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39696== by 0xF288D38: PetscInitialize (pinit.c:924) ==39696== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39696== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39696== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39696== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39696== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39696== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39696== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39696== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39696== ==39696== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39696== at 0x10CF4A1C: __open_nocancel (open64_nocancel.c:39) ==39696== by 0x10C78BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39696== by 0xF134822: ??? ==39696== by 0xF13496F: ??? ==39696== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39696== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39696== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39696== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39696== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39696== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39696== by 0xF288D38: PetscInitialize (pinit.c:924) ==39696== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39696== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39696== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39696== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39696== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39696== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39696== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39696== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39696== ==39696== Open file descriptor 114: ==39696== ==39696== ==39696== Open file descriptor 111: ==39696== ==39696== ==39696== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==39696== ==39696== ==39696== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39696== ==39696== ==39696== ==39696== HEAP SUMMARY: ==39696== in use at exit: 618,295 bytes in 8,235 blocks ==39696== total heap usage: 4,262,895 allocs, 4,254,660 frees, 1,898,476,982 bytes allocated ==39696== ==39696== LEAK SUMMARY: ==39696== definitely lost: 0 bytes in 0 blocks ==39696== indirectly lost: 0 bytes in 0 blocks ==39696== possibly lost: 0 bytes in 0 blocks ==39696== still reachable: 56 bytes in 3 blocks ==39696== suppressed: 618,239 bytes in 8,232 blocks ==39696== Reachable blocks (those to which a pointer was found) are not shown. ==39696== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39696== ==39696== For lists of detected and suppressed errors, rerun with: -s ==39696== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)