==26117== Memcheck, a memory error detector ==26117== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26117== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26117== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26117== Parent PID: 24035 ==26117== ==26117== ==26117== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26117== Open file descriptor 12: ==26117== at 0xF8DE07D: pipe (pipe.c:29) ==26117== by 0x196AB07D: ??? ==26117== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26117== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26117== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26117== by 0x1020ED38: PetscInitialize (pinit.c:924) ==26117== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26117== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26117== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26117== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26117== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26117== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26117== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26117== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26117== ==26117== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26117== at 0xF8E2A1C: __open_nocancel (open64_nocancel.c:39) ==26117== by 0xF866BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26117== by 0xF134822: ??? ==26117== by 0xF13496F: ??? ==26117== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26117== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26117== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26117== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26117== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26117== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26117== by 0x1020ED38: PetscInitialize (pinit.c:924) ==26117== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26117== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26117== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26117== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26117== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26117== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26117== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26117== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26117== ==26117== Open file descriptor 114: ==26117== ==26117== ==26117== Open file descriptor 111: ==26117== ==26117== ==26117== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==26117== ==26117== ==26117== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26117== ==26117== ==26117== ==26117== HEAP SUMMARY: ==26117== in use at exit: 618,366 bytes in 8,239 blocks ==26117== total heap usage: 53,078 allocs, 44,839 frees, 1,338,902,066 bytes allocated ==26117== ==26117== LEAK SUMMARY: ==26117== definitely lost: 0 bytes in 0 blocks ==26117== indirectly lost: 0 bytes in 0 blocks ==26117== possibly lost: 0 bytes in 0 blocks ==26117== still reachable: 56 bytes in 3 blocks ==26117== suppressed: 618,310 bytes in 8,236 blocks ==26117== Reachable blocks (those to which a pointer was found) are not shown. ==26117== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26117== ==26117== For lists of detected and suppressed errors, rerun with: -s ==26117== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)