==41133== Memcheck, a memory error detector ==41133== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41133== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41133== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==41133== Parent PID: 23999 ==41133== ==41133== ==41133== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41133== Open file descriptor 12: ==41133== at 0xA7DF07D: pipe (pipe.c:29) ==41133== by 0x1432407D: ??? ==41133== by 0xFB2B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41133== by 0xBED8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41133== by 0xBE71D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41133== by 0xAB68D38: PetscInitialize (pinit.c:924) ==41133== by 0xA0C61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41133== by 0xA0C6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41133== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41133== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41133== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41133== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41133== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41133== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41133== ==41133== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41133== at 0xA7E3A1C: __open_nocancel (open64_nocancel.c:39) ==41133== by 0xA767BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41133== by 0xA100822: ??? ==41133== by 0xA10096F: ??? ==41133== by 0xFBD06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41133== by 0xFBD0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41133== by 0xFB86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41133== by 0xFB2B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41133== by 0xBED8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41133== by 0xBE71D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41133== by 0xAB68D38: PetscInitialize (pinit.c:924) ==41133== by 0xA0C61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41133== by 0xA0C6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41133== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41133== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41133== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41133== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41133== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41133== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41133== ==41133== Open file descriptor 113: ==41133== ==41133== ==41133== Open file descriptor 110: ==41133== ==41133== ==41133== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==41133== ==41133== ==41133== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41133== ==41133== ==41133== ==41133== HEAP SUMMARY: ==41133== in use at exit: 618,761 bytes in 8,244 blocks ==41133== total heap usage: 3,540,034 allocs, 3,531,790 frees, 2,046,652,852 bytes allocated ==41133== ==41133== LEAK SUMMARY: ==41133== definitely lost: 0 bytes in 0 blocks ==41133== indirectly lost: 0 bytes in 0 blocks ==41133== possibly lost: 0 bytes in 0 blocks ==41133== still reachable: 24 bytes in 2 blocks ==41133== suppressed: 618,737 bytes in 8,242 blocks ==41133== Reachable blocks (those to which a pointer was found) are not shown. ==41133== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41133== ==41133== For lists of detected and suppressed errors, rerun with: -s ==41133== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 31)