==25980== Memcheck, a memory error detector ==25980== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25980== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25980== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==25980== Parent PID: 24087 ==25980== ==25980== ==25980== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25980== Open file descriptor 12: ==25980== at 0xF7F707D: pipe (pipe.c:29) ==25980== by 0x196AB07D: ??? ==25980== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25980== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x10125D38: PetscInitialize (pinit.c:924) ==25980== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25980== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25980== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25980== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25980== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25980== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25980== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25980== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25980== ==25980== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25980== at 0xF7FBA1C: __open_nocancel (open64_nocancel.c:39) ==25980== by 0xF77FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25980== by 0xF134822: ??? ==25980== by 0xF13496F: ??? ==25980== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25980== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x10125D38: PetscInitialize (pinit.c:924) ==25980== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25980== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25980== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25980== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25980== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25980== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25980== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25980== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25980== ==25980== Open file descriptor 113: ==25980== ==25980== ==25980== Open file descriptor 110: ==25980== ==25980== ==25980== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==25980== ==25980== ==25980== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25980== ==25980== ==25980== ==25980== HEAP SUMMARY: ==25980== in use at exit: 618,370 bytes in 8,239 blocks ==25980== total heap usage: 418,858 allocs, 410,619 frees, 1,353,657,572 bytes allocated ==25980== ==25980== LEAK SUMMARY: ==25980== definitely lost: 0 bytes in 0 blocks ==25980== indirectly lost: 0 bytes in 0 blocks ==25980== possibly lost: 0 bytes in 0 blocks ==25980== still reachable: 56 bytes in 3 blocks ==25980== suppressed: 618,314 bytes in 8,236 blocks ==25980== Reachable blocks (those to which a pointer was found) are not shown. ==25980== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25980== ==25980== For lists of detected and suppressed errors, rerun with: -s ==25980== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)