==41662== Memcheck, a memory error detector ==41662== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41662== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41662== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41662== Parent PID: 24041 ==41662== ==41662== ==41662== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41662== Open file descriptor 12: ==41662== at 0x87AE07D: pipe (pipe.c:29) ==41662== by 0x1432407D: ??? ==41662== by 0xEE1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41662== by 0x9EA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0x9E42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0x8B39D38: PetscInitialize (pinit.c:924) ==41662== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41662== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41662== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41662== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41662== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41662== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41662== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41662== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41662== ==41662== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41662== at 0x87B2A1C: __open_nocancel (open64_nocancel.c:39) ==41662== by 0x8736BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41662== by 0x8416822: ??? ==41662== by 0x841696F: ??? ==41662== by 0xEEC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xEEC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xEE7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41662== by 0xEE1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41662== by 0x9EA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0x9E42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41662== by 0x8B39D38: PetscInitialize (pinit.c:924) ==41662== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41662== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41662== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41662== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41662== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41662== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41662== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41662== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41662== ==41662== Open file descriptor 113: ==41662== ==41662== ==41662== Open file descriptor 110: ==41662== ==41662== ==41662== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41662== ==41662== ==41662== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41662== ==41662== ==41662== ==41662== HEAP SUMMARY: ==41662== in use at exit: 621,886 bytes in 8,242 blocks ==41662== total heap usage: 3,054,221 allocs, 3,045,979 frees, 1,612,720,344 bytes allocated ==41662== ==41662== LEAK SUMMARY: ==41662== definitely lost: 0 bytes in 0 blocks ==41662== indirectly lost: 0 bytes in 0 blocks ==41662== possibly lost: 0 bytes in 0 blocks ==41662== still reachable: 3,629 bytes in 10 blocks ==41662== suppressed: 618,257 bytes in 8,232 blocks ==41662== Reachable blocks (those to which a pointer was found) are not shown. ==41662== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41662== ==41662== For lists of detected and suppressed errors, rerun with: -s ==41662== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)