==26223== Memcheck, a memory error detector ==26223== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26223== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26223== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26223== Parent PID: 24098 ==26223== ==26223== ==26223== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26223== Open file descriptor 12: ==26223== at 0xF09507D: pipe (pipe.c:29) ==26223== by 0x196AA07D: ??? ==26223== by 0x13BFE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26223== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26223== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26223== by 0xD62DD38: PetscInitialize (pinit.c:924) ==26223== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26223== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26223== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26223== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26223== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26223== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26223== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26223== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26223== ==26223== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26223== at 0xF099A1C: __open_nocancel (open64_nocancel.c:39) ==26223== by 0xF01DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26223== by 0xD4D7822: ??? ==26223== by 0xD4D796F: ??? ==26223== by 0x13CA36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26223== by 0x13CA3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26223== by 0x13C59922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26223== by 0x13BFE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26223== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26223== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26223== by 0xD62DD38: PetscInitialize (pinit.c:924) ==26223== by 0xD49D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26223== by 0xD49D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26223== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26223== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26223== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26223== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26223== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26223== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26223== ==26223== Open file descriptor 113: ==26223== ==26223== ==26223== Open file descriptor 110: ==26223== ==26223== ==26223== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26223== ==26223== ==26223== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26223== ==26223== ==26223== ==26223== HEAP SUMMARY: ==26223== in use at exit: 618,370 bytes in 8,239 blocks ==26223== total heap usage: 67,529 allocs, 59,290 frees, 1,339,983,580 bytes allocated ==26223== ==26223== LEAK SUMMARY: ==26223== definitely lost: 0 bytes in 0 blocks ==26223== indirectly lost: 0 bytes in 0 blocks ==26223== possibly lost: 0 bytes in 0 blocks ==26223== still reachable: 56 bytes in 3 blocks ==26223== suppressed: 618,314 bytes in 8,236 blocks ==26223== Reachable blocks (those to which a pointer was found) are not shown. ==26223== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26223== ==26223== For lists of detected and suppressed errors, rerun with: -s ==26223== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)