==43490== Memcheck, a memory error detector ==43490== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43490== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43490== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43490== Parent PID: 24027 ==43490== ==43490== ==43490== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43490== Open file descriptor 12: ==43490== at 0x892407D: pipe (pipe.c:29) ==43490== by 0x1432507D: ??? ==43490== by 0xEE6D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43490== by 0xA01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43490== by 0x9FB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43490== by 0x8CAFD38: PetscInitialize (pinit.c:924) ==43490== by 0x820D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43490== by 0x820D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43490== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43490== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43490== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43490== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43490== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43490== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43490== ==43490== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43490== at 0x8928A1C: __open_nocancel (open64_nocancel.c:39) ==43490== by 0x88ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43490== by 0x8247822: ??? ==43490== by 0x824796F: ??? ==43490== by 0xEF126DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43490== by 0xEF12938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43490== by 0xEEC8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43490== by 0xEE6D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43490== by 0xA01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43490== by 0x9FB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43490== by 0x8CAFD38: PetscInitialize (pinit.c:924) ==43490== by 0x820D1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43490== by 0x820D227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43490== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43490== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43490== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43490== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43490== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43490== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43490== ==43490== Open file descriptor 113: ==43490== ==43490== ==43490== Open file descriptor 110: ==43490== ==43490== ==43490== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43490== ==43490== ==43490== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43490== ==43490== ==43490== ==43490== HEAP SUMMARY: ==43490== in use at exit: 625,891 bytes in 8,260 blocks ==43490== total heap usage: 4,756,896 allocs, 4,748,636 frees, 2,828,621,103 bytes allocated ==43490== ==43490== LEAK SUMMARY: ==43490== definitely lost: 0 bytes in 0 blocks ==43490== indirectly lost: 0 bytes in 0 blocks ==43490== possibly lost: 0 bytes in 0 blocks ==43490== still reachable: 7,156 bytes in 18 blocks ==43490== suppressed: 618,735 bytes in 8,242 blocks ==43490== Reachable blocks (those to which a pointer was found) are not shown. ==43490== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43490== ==43490== For lists of detected and suppressed errors, rerun with: -s ==43490== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 229 from 32)