==25439== Memcheck, a memory error detector ==25439== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25439== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25439== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25439== Parent PID: 24025 ==25439== ==25439== ==25439== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25439== Open file descriptor 12: ==25439== at 0xF7F707D: pipe (pipe.c:29) ==25439== by 0x196AB07D: ??? ==25439== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25439== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25439== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25439== by 0x10125D38: PetscInitialize (pinit.c:924) ==25439== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25439== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25439== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25439== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25439== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25439== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25439== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25439== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25439== ==25439== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25439== at 0xF7FBA1C: __open_nocancel (open64_nocancel.c:39) ==25439== by 0xF77FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25439== by 0xF134822: ??? ==25439== by 0xF13496F: ??? ==25439== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25439== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25439== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25439== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25439== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25439== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25439== by 0x10125D38: PetscInitialize (pinit.c:924) ==25439== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25439== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25439== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25439== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25439== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25439== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25439== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25439== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25439== ==25439== Open file descriptor 113: ==25439== ==25439== ==25439== Open file descriptor 110: ==25439== ==25439== ==25439== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25439== ==25439== ==25439== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25439== ==25439== ==25439== ==25439== HEAP SUMMARY: ==25439== in use at exit: 618,430 bytes in 8,240 blocks ==25439== total heap usage: 69,416 allocs, 61,176 frees, 1,340,699,017 bytes allocated ==25439== ==25439== LEAK SUMMARY: ==25439== definitely lost: 0 bytes in 0 blocks ==25439== indirectly lost: 0 bytes in 0 blocks ==25439== possibly lost: 0 bytes in 0 blocks ==25439== still reachable: 120 bytes in 4 blocks ==25439== suppressed: 618,310 bytes in 8,236 blocks ==25439== Reachable blocks (those to which a pointer was found) are not shown. ==25439== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25439== ==25439== For lists of detected and suppressed errors, rerun with: -s ==25439== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)