==26122== Memcheck, a memory error detector ==26122== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26122== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26122== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26122== Parent PID: 24025 ==26122== ==26122== ==26122== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26122== Open file descriptor 12: ==26122== at 0x10DD707D: pipe (pipe.c:29) ==26122== by 0x196AB07D: ??? ==26122== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26122== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26122== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26122== by 0xF288D38: PetscInitialize (pinit.c:924) ==26122== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26122== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26122== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26122== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26122== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26122== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26122== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26122== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26122== ==26122== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26122== at 0x10DDBA1C: __open_nocancel (open64_nocancel.c:39) ==26122== by 0x10D5FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26122== by 0xF134822: ??? ==26122== by 0xF13496F: ??? ==26122== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26122== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26122== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26122== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26122== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26122== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26122== by 0xF288D38: PetscInitialize (pinit.c:924) ==26122== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26122== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26122== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26122== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26122== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26122== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26122== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26122== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26122== ==26122== Open file descriptor 113: ==26122== ==26122== ==26122== Open file descriptor 110: ==26122== ==26122== ==26122== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26122== ==26122== ==26122== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26122== ==26122== ==26122== ==26122== HEAP SUMMARY: ==26122== in use at exit: 618,366 bytes in 8,239 blocks ==26122== total heap usage: 74,950 allocs, 66,711 frees, 1,343,982,975 bytes allocated ==26122== ==26122== LEAK SUMMARY: ==26122== definitely lost: 0 bytes in 0 blocks ==26122== indirectly lost: 0 bytes in 0 blocks ==26122== possibly lost: 0 bytes in 0 blocks ==26122== still reachable: 56 bytes in 3 blocks ==26122== suppressed: 618,310 bytes in 8,236 blocks ==26122== Reachable blocks (those to which a pointer was found) are not shown. ==26122== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26122== ==26122== For lists of detected and suppressed errors, rerun with: -s ==26122== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)