==26065== Memcheck, a memory error detector ==26065== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26065== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26065== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26065== Parent PID: 23942 ==26065== ==26065== ==26065== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26065== Open file descriptor 12: ==26065== at 0x10DD707D: pipe (pipe.c:29) ==26065== by 0x196AB07D: ??? ==26065== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26065== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26065== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26065== by 0xF288D38: PetscInitialize (pinit.c:924) ==26065== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26065== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26065== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26065== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26065== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26065== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26065== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26065== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26065== ==26065== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26065== at 0x10DDBA1C: __open_nocancel (open64_nocancel.c:39) ==26065== by 0x10D5FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26065== by 0xF134822: ??? ==26065== by 0xF13496F: ??? ==26065== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26065== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26065== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26065== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26065== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26065== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26065== by 0xF288D38: PetscInitialize (pinit.c:924) ==26065== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26065== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26065== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26065== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26065== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26065== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26065== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26065== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26065== ==26065== Open file descriptor 114: ==26065== ==26065== ==26065== Open file descriptor 111: ==26065== ==26065== ==26065== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26065== ==26065== ==26065== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26065== ==26065== ==26065== ==26065== HEAP SUMMARY: ==26065== in use at exit: 618,370 bytes in 8,239 blocks ==26065== total heap usage: 74,948 allocs, 66,709 frees, 1,343,982,491 bytes allocated ==26065== ==26065== LEAK SUMMARY: ==26065== definitely lost: 0 bytes in 0 blocks ==26065== indirectly lost: 0 bytes in 0 blocks ==26065== possibly lost: 0 bytes in 0 blocks ==26065== still reachable: 56 bytes in 3 blocks ==26065== suppressed: 618,314 bytes in 8,236 blocks ==26065== Reachable blocks (those to which a pointer was found) are not shown. ==26065== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26065== ==26065== For lists of detected and suppressed errors, rerun with: -s ==26065== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)