==40992== Memcheck, a memory error detector ==40992== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40992== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40992== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestVentilationProblem -malloc_debug -malloc_dump -memory_info ==40992== Parent PID: 23942 ==40992== ==40992== ==40992== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40992== Open file descriptor 12: ==40992== at 0x6E5907D: pipe (pipe.c:29) ==40992== by 0x107A407D: ??? ==40992== by 0xC01A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40992== by 0x83D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40992== by 0x836DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40992== by 0x7064D38: PetscInitialize (pinit.c:924) ==40992== by 0x66751D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40992== by 0x6675227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40992== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40992== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40992== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40992== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40992== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40992== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40992== ==40992== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40992== at 0x6E5DA1C: __open_nocancel (open64_nocancel.c:39) ==40992== by 0x6DE1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40992== by 0x66AF822: ??? ==40992== by 0x66AF96F: ??? ==40992== by 0xC0BF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40992== by 0xC0BF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40992== by 0xC075922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40992== by 0xC01A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40992== by 0x83D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40992== by 0x836DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40992== by 0x7064D38: PetscInitialize (pinit.c:924) ==40992== by 0x66751D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40992== by 0x6675227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40992== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40992== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40992== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40992== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40992== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40992== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40992== ==40992== Open file descriptor 114: ==40992== ==40992== ==40992== Open file descriptor 111: ==40992== ==40992== ==40992== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVentilationProblem_valgrind.txt ==40992== ==40992== ==40992== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40992== ==40992== ==40992== ==40992== HEAP SUMMARY: ==40992== in use at exit: 618,265 bytes in 8,234 blocks ==40992== total heap usage: 5,806,636 allocs, 5,798,402 frees, 1,825,960,002 bytes allocated ==40992== ==40992== LEAK SUMMARY: ==40992== definitely lost: 0 bytes in 0 blocks ==40992== indirectly lost: 0 bytes in 0 blocks ==40992== possibly lost: 0 bytes in 0 blocks ==40992== still reachable: 24 bytes in 2 blocks ==40992== suppressed: 618,241 bytes in 8,232 blocks ==40992== Reachable blocks (those to which a pointer was found) are not shown. ==40992== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40992== ==40992== For lists of detected and suppressed errors, rerun with: -s ==40992== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)