==39971== Memcheck, a memory error detector ==39971== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39971== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39971== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==39971== Parent PID: 24027 ==39971== ==39971== ==39971== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39971== Open file descriptor 12: ==39971== at 0x10D9707D: pipe (pipe.c:29) ==39971== by 0x196AD07D: ??? ==39971== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39971== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39971== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39971== by 0xF225D38: PetscInitialize (pinit.c:924) ==39971== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39971== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39971== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39971== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39971== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39971== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39971== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39971== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==39971== ==39971== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39971== at 0x10D9BA1C: __open_nocancel (open64_nocancel.c:39) ==39971== by 0x10D1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39971== by 0x104B4822: ??? ==39971== by 0x104B496F: ??? ==39971== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39971== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39971== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39971== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39971== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39971== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39971== by 0xF225D38: PetscInitialize (pinit.c:924) ==39971== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39971== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39971== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39971== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39971== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39971== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39971== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39971== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==39971== ==39971== Open file descriptor 115: ==39971== ==39971== ==39971== Open file descriptor 112: ==39971== ==39971== ==39971== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==39971== ==39971== ==39971== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39971== ==39971== ==39971== ==39971== HEAP SUMMARY: ==39971== in use at exit: 618,297 bytes in 8,235 blocks ==39971== total heap usage: 11,072,724 allocs, 11,064,489 frees, 4,765,710,648 bytes allocated ==39971== ==39971== LEAK SUMMARY: ==39971== definitely lost: 0 bytes in 0 blocks ==39971== indirectly lost: 0 bytes in 0 blocks ==39971== possibly lost: 0 bytes in 0 blocks ==39971== still reachable: 56 bytes in 3 blocks ==39971== suppressed: 618,241 bytes in 8,232 blocks ==39971== Reachable blocks (those to which a pointer was found) are not shown. ==39971== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39971== ==39971== For lists of detected and suppressed errors, rerun with: -s ==39971== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)