==25952== Memcheck, a memory error detector ==25952== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25952== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25952== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==25952== Parent PID: 23903 ==25952== ==25952== ==25952== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25952== Open file descriptor 12: ==25952== at 0x10D9707D: pipe (pipe.c:29) ==25952== by 0x196AD07D: ??? ==25952== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25952== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25952== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25952== by 0xF225D38: PetscInitialize (pinit.c:924) ==25952== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25952== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25952== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25952== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25952== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25952== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25952== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25952== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==25952== ==25952== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25952== at 0x10D9BA1C: __open_nocancel (open64_nocancel.c:39) ==25952== by 0x10D1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25952== by 0x104B4822: ??? ==25952== by 0x104B496F: ??? ==25952== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25952== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25952== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25952== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25952== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25952== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25952== by 0xF225D38: PetscInitialize (pinit.c:924) ==25952== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25952== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25952== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25952== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25952== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25952== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25952== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25952== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==25952== ==25952== Open file descriptor 115: ==25952== ==25952== ==25952== Open file descriptor 112: ==25952== ==25952== ==25952== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==25952== ==25952== ==25952== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25952== ==25952== ==25952== ==25952== HEAP SUMMARY: ==25952== in use at exit: 618,350 bytes in 8,239 blocks ==25952== total heap usage: 221,710 allocs, 213,471 frees, 1,363,645,475 bytes allocated ==25952== ==25952== LEAK SUMMARY: ==25952== definitely lost: 0 bytes in 0 blocks ==25952== indirectly lost: 0 bytes in 0 blocks ==25952== possibly lost: 0 bytes in 0 blocks ==25952== still reachable: 56 bytes in 3 blocks ==25952== suppressed: 618,294 bytes in 8,236 blocks ==25952== Reachable blocks (those to which a pointer was found) are not shown. ==25952== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25952== ==25952== For lists of detected and suppressed errors, rerun with: -s ==25952== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)