==25760== Memcheck, a memory error detector ==25760== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25760== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25760== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==25760== Parent PID: 23947 ==25760== ==25760== ==25760== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25760== Open file descriptor 12: ==25760== at 0xF88207D: pipe (pipe.c:29) ==25760== by 0x196F407D: ??? ==25760== by 0x14CFA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25760== by 0x114E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x11479D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x1016ED38: PetscInitialize (pinit.c:924) ==25760== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25760== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25760== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25760== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25760== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25760== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25760== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25760== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==25760== ==25760== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25760== at 0xF886A1C: __open_nocancel (open64_nocancel.c:39) ==25760== by 0xF80ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25760== by 0xF17D822: ??? ==25760== by 0xF17D96F: ??? ==25760== by 0x14D9F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14D9F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14D55922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25760== by 0x14CFA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25760== by 0x114E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x11479D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25760== by 0x1016ED38: PetscInitialize (pinit.c:924) ==25760== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25760== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25760== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25760== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25760== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25760== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25760== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25760== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==25760== ==25760== Open file descriptor 116: ==25760== ==25760== ==25760== Open file descriptor 113: ==25760== ==25760== ==25760== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==25760== ==25760== ==25760== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25760== ==25760== ==25760== ==25760== HEAP SUMMARY: ==25760== in use at exit: 618,354 bytes in 8,239 blocks ==25760== total heap usage: 75,824 allocs, 67,585 frees, 1,347,377,463 bytes allocated ==25760== ==25760== LEAK SUMMARY: ==25760== definitely lost: 0 bytes in 0 blocks ==25760== indirectly lost: 0 bytes in 0 blocks ==25760== possibly lost: 0 bytes in 0 blocks ==25760== still reachable: 56 bytes in 3 blocks ==25760== suppressed: 618,298 bytes in 8,236 blocks ==25760== Reachable blocks (those to which a pointer was found) are not shown. ==25760== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25760== ==25760== For lists of detected and suppressed errors, rerun with: -s ==25760== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)