==25317== Memcheck, a memory error detector ==25317== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25317== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25317== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==25317== Parent PID: 23947 ==25317== ==25317== ==25317== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25317== Open file descriptor 12: ==25317== at 0xED9707D: pipe (pipe.c:29) ==25317== by 0x196F407D: ??? ==25317== by 0x13C474CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25317== by 0xE9E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25317== by 0xE97FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25317== by 0xD676D38: PetscInitialize (pinit.c:924) ==25317== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25317== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25317== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25317== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25317== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25317== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25317== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25317== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25317== ==25317== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25317== at 0xED9BA1C: __open_nocancel (open64_nocancel.c:39) ==25317== by 0xED1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25317== by 0xD520822: ??? ==25317== by 0xD52096F: ??? ==25317== by 0x13CEC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25317== by 0x13CEC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25317== by 0x13CA2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25317== by 0x13C472DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25317== by 0xE9E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25317== by 0xE97FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25317== by 0xD676D38: PetscInitialize (pinit.c:924) ==25317== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25317== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25317== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25317== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25317== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25317== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25317== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25317== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25317== ==25317== Open file descriptor 116: ==25317== ==25317== ==25317== Open file descriptor 113: ==25317== ==25317== ==25317== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==25317== ==25317== ==25317== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25317== ==25317== ==25317== ==25317== HEAP SUMMARY: ==25317== in use at exit: 618,354 bytes in 8,239 blocks ==25317== total heap usage: 53,394 allocs, 45,155 frees, 1,338,993,119 bytes allocated ==25317== ==25317== LEAK SUMMARY: ==25317== definitely lost: 0 bytes in 0 blocks ==25317== indirectly lost: 0 bytes in 0 blocks ==25317== possibly lost: 0 bytes in 0 blocks ==25317== still reachable: 56 bytes in 3 blocks ==25317== suppressed: 618,298 bytes in 8,236 blocks ==25317== Reachable blocks (those to which a pointer was found) are not shown. ==25317== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25317== ==25317== For lists of detected and suppressed errors, rerun with: -s ==25317== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)