==40122== Memcheck, a memory error detector ==40122== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40122== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40122== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40122== Parent PID: 23947 ==40122== ==40122== ==40122== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40122== Open file descriptor 12: ==40122== at 0xF4A507D: pipe (pipe.c:29) ==40122== by 0x1B3B507D: ??? ==40122== by 0x165C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40122== by 0x12E87418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40122== by 0x12E20D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40122== by 0x11B17D38: PetscInitialize (pinit.c:924) ==40122== by 0xEDA81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40122== by 0xEDA8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40122== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40122== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40122== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40122== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40122== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40122== by 0x118975: main (TestCellForCrypt.cpp:18) ==40122== ==40122== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40122== at 0xF4A9A1C: __open_nocancel (open64_nocancel.c:39) ==40122== by 0xF42DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40122== by 0xEDE2822: ??? ==40122== by 0xEDE296F: ??? ==40122== by 0x1666C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40122== by 0x1666C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40122== by 0x16622922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40122== by 0x165C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40122== by 0x12E87418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40122== by 0x12E20D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40122== by 0x11B17D38: PetscInitialize (pinit.c:924) ==40122== by 0xEDA81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40122== by 0xEDA8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40122== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40122== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40122== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40122== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40122== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40122== by 0x118975: main (TestCellForCrypt.cpp:18) ==40122== ==40122== Open file descriptor 116: ==40122== ==40122== ==40122== Open file descriptor 113: ==40122== ==40122== ==40122== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40122== ==40122== ==40122== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40122== ==40122== ==40122== ==40122== HEAP SUMMARY: ==40122== in use at exit: 618,498 bytes in 8,240 blocks ==40122== total heap usage: 55,744 allocs, 47,504 frees, 1,339,198,608 bytes allocated ==40122== ==40122== LEAK SUMMARY: ==40122== definitely lost: 0 bytes in 0 blocks ==40122== indirectly lost: 0 bytes in 0 blocks ==40122== possibly lost: 0 bytes in 0 blocks ==40122== still reachable: 184 bytes in 4 blocks ==40122== suppressed: 618,314 bytes in 8,236 blocks ==40122== Reachable blocks (those to which a pointer was found) are not shown. ==40122== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40122== ==40122== For lists of detected and suppressed errors, rerun with: -s ==40122== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)