==25365== Memcheck, a memory error detector ==25365== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25365== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25365== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25365== Parent PID: 23947 ==25365== ==25365== ==25365== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25365== Open file descriptor 12: ==25365== at 0xF84007D: pipe (pipe.c:29) ==25365== by 0x196F407D: ??? ==25365== by 0x14CFA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25365== by 0x114E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25365== by 0x11479D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25365== by 0x1016ED38: PetscInitialize (pinit.c:924) ==25365== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25365== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25365== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25365== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25365== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25365== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25365== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25365== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25365== ==25365== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25365== at 0xF844A1C: __open_nocancel (open64_nocancel.c:39) ==25365== by 0xF7C8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25365== by 0xF17D822: ??? ==25365== by 0xF17D96F: ??? ==25365== by 0x14D9F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25365== by 0x14D9F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25365== by 0x14D55922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25365== by 0x14CFA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25365== by 0x114E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25365== by 0x11479D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25365== by 0x1016ED38: PetscInitialize (pinit.c:924) ==25365== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25365== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25365== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25365== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25365== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25365== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25365== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25365== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25365== ==25365== Open file descriptor 116: ==25365== ==25365== ==25365== Open file descriptor 113: ==25365== ==25365== ==25365== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25365== ==25365== ==25365== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25365== ==25365== ==25365== ==25365== HEAP SUMMARY: ==25365== in use at exit: 618,418 bytes in 8,240 blocks ==25365== total heap usage: 69,388 allocs, 61,148 frees, 1,340,696,679 bytes allocated ==25365== ==25365== LEAK SUMMARY: ==25365== definitely lost: 0 bytes in 0 blocks ==25365== indirectly lost: 0 bytes in 0 blocks ==25365== possibly lost: 0 bytes in 0 blocks ==25365== still reachable: 120 bytes in 4 blocks ==25365== suppressed: 618,298 bytes in 8,236 blocks ==25365== Reachable blocks (those to which a pointer was found) are not shown. ==25365== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25365== ==25365== For lists of detected and suppressed errors, rerun with: -s ==25365== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)