==25731== Memcheck, a memory error detector ==25731== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25731== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25731== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==25731== Parent PID: 23947 ==25731== ==25731== ==25731== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25731== Open file descriptor 12: ==25731== at 0xEFDB07D: pipe (pipe.c:29) ==25731== by 0x196F407D: ??? ==25731== by 0x13C984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25731== by 0xEC28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25731== by 0xEBC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25731== by 0xD8B8D38: PetscInitialize (pinit.c:924) ==25731== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25731== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25731== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25731== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25731== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25731== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25731== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25731== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25731== ==25731== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25731== at 0xEFDFA1C: __open_nocancel (open64_nocancel.c:39) ==25731== by 0xEF63BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25731== by 0xD764822: ??? ==25731== by 0xD76496F: ??? ==25731== by 0x13D3D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25731== by 0x13D3D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25731== by 0x13CF3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25731== by 0x13C982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25731== by 0xEC28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25731== by 0xEBC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25731== by 0xD8B8D38: PetscInitialize (pinit.c:924) ==25731== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25731== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25731== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25731== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25731== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25731== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25731== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25731== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25731== ==25731== Open file descriptor 116: ==25731== ==25731== ==25731== Open file descriptor 113: ==25731== ==25731== ==25731== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==25731== ==25731== ==25731== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25731== ==25731== ==25731== ==25731== HEAP SUMMARY: ==25731== in use at exit: 618,322 bytes in 8,238 blocks ==25731== total heap usage: 63,192 allocs, 54,954 frees, 1,339,960,251 bytes allocated ==25731== ==25731== LEAK SUMMARY: ==25731== definitely lost: 0 bytes in 0 blocks ==25731== indirectly lost: 0 bytes in 0 blocks ==25731== possibly lost: 0 bytes in 0 blocks ==25731== still reachable: 24 bytes in 2 blocks ==25731== suppressed: 618,298 bytes in 8,236 blocks ==25731== Reachable blocks (those to which a pointer was found) are not shown. ==25731== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25731== ==25731== For lists of detected and suppressed errors, rerun with: -s ==25731== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)