==26064== Memcheck, a memory error detector ==26064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26064== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26064== Parent PID: 23947 ==26064== ==26064== ==26064== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26064== Open file descriptor 12: ==26064== at 0x10E2007D: pipe (pipe.c:29) ==26064== by 0x196F407D: ??? ==26064== by 0x14C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26064== by 0x10641418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26064== by 0x105DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26064== by 0xF2D1D38: PetscInitialize (pinit.c:924) ==26064== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26064== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26064== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26064== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26064== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26064== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26064== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26064== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26064== ==26064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26064== at 0x10E24A1C: __open_nocancel (open64_nocancel.c:39) ==26064== by 0x10DA8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26064== by 0xF17D822: ??? ==26064== by 0xF17D96F: ??? ==26064== by 0x14D016DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26064== by 0x14D01938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26064== by 0x14CB7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26064== by 0x14C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26064== by 0x10641418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26064== by 0x105DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26064== by 0xF2D1D38: PetscInitialize (pinit.c:924) ==26064== by 0xF1431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26064== by 0xF143227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26064== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26064== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26064== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26064== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26064== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26064== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26064== ==26064== Open file descriptor 116: ==26064== ==26064== ==26064== Open file descriptor 113: ==26064== ==26064== ==26064== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26064== ==26064== ==26064== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26064== ==26064== ==26064== ==26064== HEAP SUMMARY: ==26064== in use at exit: 618,354 bytes in 8,239 blocks ==26064== total heap usage: 74,924 allocs, 66,685 frees, 1,343,982,141 bytes allocated ==26064== ==26064== LEAK SUMMARY: ==26064== definitely lost: 0 bytes in 0 blocks ==26064== indirectly lost: 0 bytes in 0 blocks ==26064== possibly lost: 0 bytes in 0 blocks ==26064== still reachable: 56 bytes in 3 blocks ==26064== suppressed: 618,298 bytes in 8,236 blocks ==26064== Reachable blocks (those to which a pointer was found) are not shown. ==26064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26064== ==26064== For lists of detected and suppressed errors, rerun with: -s ==26064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)