==25318== Memcheck, a memory error detector ==25318== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25318== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25318== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25318== Parent PID: 23945 ==25318== ==25318== ==25318== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25318== Open file descriptor 12: ==25318== at 0xEFDA07D: pipe (pipe.c:29) ==25318== by 0x196F207D: ??? ==25318== by 0x13C974CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25318== by 0xEC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0xEBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0xD8B7D38: PetscInitialize (pinit.c:924) ==25318== by 0xD7291D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25318== by 0xD729227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25318== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25318== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25318== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25318== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25318== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25318== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25318== ==25318== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25318== at 0xEFDEA1C: __open_nocancel (open64_nocancel.c:39) ==25318== by 0xEF62BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25318== by 0xD763822: ??? ==25318== by 0xD76396F: ??? ==25318== by 0x13D3C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x13D3C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x13CF2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x13C972DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25318== by 0xEC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0xEBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0xD8B7D38: PetscInitialize (pinit.c:924) ==25318== by 0xD7291D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25318== by 0xD729227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25318== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25318== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25318== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25318== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25318== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25318== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25318== ==25318== Open file descriptor 115: ==25318== ==25318== ==25318== Open file descriptor 112: ==25318== ==25318== ==25318== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25318== ==25318== ==25318== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25318== ==25318== ==25318== ==25318== HEAP SUMMARY: ==25318== in use at exit: 618,354 bytes in 8,239 blocks ==25318== total heap usage: 547,374 allocs, 539,135 frees, 1,344,757,550 bytes allocated ==25318== ==25318== LEAK SUMMARY: ==25318== definitely lost: 0 bytes in 0 blocks ==25318== indirectly lost: 0 bytes in 0 blocks ==25318== possibly lost: 0 bytes in 0 blocks ==25318== still reachable: 56 bytes in 3 blocks ==25318== suppressed: 618,298 bytes in 8,236 blocks ==25318== Reachable blocks (those to which a pointer was found) are not shown. ==25318== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25318== ==25318== For lists of detected and suppressed errors, rerun with: -s ==25318== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)