==25290== Memcheck, a memory error detector ==25290== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25290== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25290== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25290== Parent PID: 23945 ==25290== ==25290== ==25290== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25290== Open file descriptor 12: ==25290== at 0xED5407D: pipe (pipe.c:29) ==25290== by 0x196F207D: ??? ==25290== by 0x13C464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25290== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25290== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25290== by 0xD610D38: PetscInitialize (pinit.c:924) ==25290== by 0xD4E51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25290== by 0xD4E5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25290== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25290== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25290== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25290== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25290== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25290== by 0x1222F5: main (TestCell.cpp:19) ==25290== ==25290== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25290== at 0xED58A1C: __open_nocancel (open64_nocancel.c:39) ==25290== by 0xECDCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25290== by 0xE89F822: ??? ==25290== by 0xE89F96F: ??? ==25290== by 0x13CEB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25290== by 0x13CEB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25290== by 0x13CA1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25290== by 0x13C462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25290== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25290== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25290== by 0xD610D38: PetscInitialize (pinit.c:924) ==25290== by 0xD4E51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25290== by 0xD4E5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25290== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25290== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25290== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25290== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25290== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25290== by 0x1222F5: main (TestCell.cpp:19) ==25290== ==25290== Open file descriptor 115: ==25290== ==25290== ==25290== Open file descriptor 112: ==25290== ==25290== ==25290== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25290== ==25290== ==25290== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25290== ==25290== ==25290== ==25290== HEAP SUMMARY: ==25290== in use at exit: 618,409 bytes in 8,236 blocks ==25290== total heap usage: 5,183,493 allocs, 5,175,257 frees, 1,819,189,129 bytes allocated ==25290== ==25290== LEAK SUMMARY: ==25290== definitely lost: 0 bytes in 0 blocks ==25290== indirectly lost: 0 bytes in 0 blocks ==25290== possibly lost: 0 bytes in 0 blocks ==25290== still reachable: 184 bytes in 4 blocks ==25290== suppressed: 618,225 bytes in 8,232 blocks ==25290== Reachable blocks (those to which a pointer was found) are not shown. ==25290== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25290== ==25290== For lists of detected and suppressed errors, rerun with: -s ==25290== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)