==25369== Memcheck, a memory error detector ==25369== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25369== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25369== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25369== Parent PID: 23945 ==25369== ==25369== ==25369== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25369== Open file descriptor 12: ==25369== at 0xF83F07D: pipe (pipe.c:29) ==25369== by 0x196F207D: ??? ==25369== by 0x14CF84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25369== by 0x114DF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25369== by 0x11478D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25369== by 0x1016DD38: PetscInitialize (pinit.c:924) ==25369== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25369== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25369== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25369== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25369== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25369== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25369== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25369== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25369== ==25369== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25369== at 0xF843A1C: __open_nocancel (open64_nocancel.c:39) ==25369== by 0xF7C7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25369== by 0xF17C822: ??? ==25369== by 0xF17C96F: ??? ==25369== by 0x14D9D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25369== by 0x14D9D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25369== by 0x14D53922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25369== by 0x14CF82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25369== by 0x114DF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25369== by 0x11478D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25369== by 0x1016DD38: PetscInitialize (pinit.c:924) ==25369== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25369== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25369== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25369== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25369== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25369== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25369== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25369== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25369== ==25369== Open file descriptor 115: ==25369== ==25369== ==25369== Open file descriptor 112: ==25369== ==25369== ==25369== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25369== ==25369== ==25369== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25369== ==25369== ==25369== ==25369== HEAP SUMMARY: ==25369== in use at exit: 618,418 bytes in 8,240 blocks ==25369== total heap usage: 69,391 allocs, 61,151 frees, 1,340,696,637 bytes allocated ==25369== ==25369== LEAK SUMMARY: ==25369== definitely lost: 0 bytes in 0 blocks ==25369== indirectly lost: 0 bytes in 0 blocks ==25369== possibly lost: 0 bytes in 0 blocks ==25369== still reachable: 120 bytes in 4 blocks ==25369== suppressed: 618,298 bytes in 8,236 blocks ==25369== Reachable blocks (those to which a pointer was found) are not shown. ==25369== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25369== ==25369== For lists of detected and suppressed errors, rerun with: -s ==25369== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)