==39679== Memcheck, a memory error detector ==39679== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39679== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39679== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==39679== Parent PID: 23945 ==39679== ==39679== ==39679== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39679== Open file descriptor 12: ==39679== at 0x10E1F07D: pipe (pipe.c:29) ==39679== by 0x196F207D: ??? ==39679== by 0x14C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39679== by 0x10640418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39679== by 0x105D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39679== by 0xF2D0D38: PetscInitialize (pinit.c:924) ==39679== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39679== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39679== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39679== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39679== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39679== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39679== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39679== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39679== ==39679== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39679== at 0x10E23A1C: __open_nocancel (open64_nocancel.c:39) ==39679== by 0x10DA7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39679== by 0xF17C822: ??? ==39679== by 0xF17C96F: ??? ==39679== by 0x14CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39679== by 0x14CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39679== by 0x14CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39679== by 0x14C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39679== by 0x10640418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39679== by 0x105D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39679== by 0xF2D0D38: PetscInitialize (pinit.c:924) ==39679== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39679== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39679== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39679== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39679== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39679== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39679== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39679== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39679== ==39679== Open file descriptor 115: ==39679== ==39679== ==39679== Open file descriptor 112: ==39679== ==39679== ==39679== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==39679== ==39679== ==39679== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39679== ==39679== ==39679== ==39679== HEAP SUMMARY: ==39679== in use at exit: 618,281 bytes in 8,235 blocks ==39679== total heap usage: 2,717,535 allocs, 2,709,300 frees, 1,507,787,527 bytes allocated ==39679== ==39679== LEAK SUMMARY: ==39679== definitely lost: 0 bytes in 0 blocks ==39679== indirectly lost: 0 bytes in 0 blocks ==39679== possibly lost: 0 bytes in 0 blocks ==39679== still reachable: 56 bytes in 3 blocks ==39679== suppressed: 618,225 bytes in 8,232 blocks ==39679== Reachable blocks (those to which a pointer was found) are not shown. ==39679== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39679== ==39679== For lists of detected and suppressed errors, rerun with: -s ==39679== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)