==40177== Memcheck, a memory error detector ==40177== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40177== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40177== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptCellsGenerator -malloc_debug -malloc_dump -memory_info ==40177== Parent PID: 23945 ==40177== ==40177== ==40177== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40177== Open file descriptor 12: ==40177== at 0x125B607D: pipe (pipe.c:29) ==40177== by 0x1B3B407D: ??? ==40177== by 0x1651F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40177== by 0x11EBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40177== by 0x11E57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40177== by 0x10B2BD38: PetscInitialize (pinit.c:924) ==40177== by 0x10A021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40177== by 0x10A02227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40177== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40177== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40177== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40177== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40177== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40177== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40177== ==40177== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40177== at 0x125BAA1C: __open_nocancel (open64_nocancel.c:39) ==40177== by 0x1253EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40177== by 0x11DBA822: ??? ==40177== by 0x11DBA96F: ??? ==40177== by 0x165C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40177== by 0x165C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40177== by 0x1657A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40177== by 0x1651F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40177== by 0x11EBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40177== by 0x11E57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40177== by 0x10B2BD38: PetscInitialize (pinit.c:924) ==40177== by 0x10A021D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40177== by 0x10A02227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40177== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40177== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40177== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40177== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40177== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40177== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40177== ==40177== Open file descriptor 115: ==40177== ==40177== ==40177== Open file descriptor 112: ==40177== ==40177== ==40177== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptCellsGenerator_valgrind.txt ==40177== ==40177== ==40177== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40177== ==40177== ==40177== ==40177== HEAP SUMMARY: ==40177== in use at exit: 618,498 bytes in 8,240 blocks ==40177== total heap usage: 87,311 allocs, 79,071 frees, 1,342,270,001 bytes allocated ==40177== ==40177== LEAK SUMMARY: ==40177== definitely lost: 0 bytes in 0 blocks ==40177== indirectly lost: 0 bytes in 0 blocks ==40177== possibly lost: 0 bytes in 0 blocks ==40177== still reachable: 184 bytes in 4 blocks ==40177== suppressed: 618,314 bytes in 8,236 blocks ==40177== Reachable blocks (those to which a pointer was found) are not shown. ==40177== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40177== ==40177== For lists of detected and suppressed errors, rerun with: -s ==40177== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)