==25441== Memcheck, a memory error detector ==25441== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25441== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25441== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25441== Parent PID: 23945 ==25441== ==25441== ==25441== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25441== Open file descriptor 12: ==25441== at 0x110D507D: pipe (pipe.c:29) ==25441== by 0x196F207D: ??? ==25441== by 0x14C584CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25441== by 0x109DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0x10976D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xF66DD38: PetscInitialize (pinit.c:924) ==25441== by 0xF4DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25441== by 0xF4DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25441== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25441== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25441== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25441== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25441== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25441== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25441== ==25441== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25441== at 0x110D9A1C: __open_nocancel (open64_nocancel.c:39) ==25441== by 0x1105DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25441== by 0xF519822: ??? ==25441== by 0xF51996F: ??? ==25441== by 0x14CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x14CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x14CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25441== by 0x14C582DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25441== by 0x109DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0x10976D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25441== by 0xF66DD38: PetscInitialize (pinit.c:924) ==25441== by 0xF4DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25441== by 0xF4DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25441== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25441== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25441== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25441== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25441== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25441== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25441== ==25441== Open file descriptor 115: ==25441== ==25441== ==25441== Open file descriptor 112: ==25441== ==25441== ==25441== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25441== ==25441== ==25441== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25441== ==25441== ==25441== ==25441== HEAP SUMMARY: ==25441== in use at exit: 618,281 bytes in 8,235 blocks ==25441== total heap usage: 4,559,523 allocs, 4,551,288 frees, 1,908,080,872 bytes allocated ==25441== ==25441== LEAK SUMMARY: ==25441== definitely lost: 0 bytes in 0 blocks ==25441== indirectly lost: 0 bytes in 0 blocks ==25441== possibly lost: 0 bytes in 0 blocks ==25441== still reachable: 56 bytes in 3 blocks ==25441== suppressed: 618,225 bytes in 8,232 blocks ==25441== Reachable blocks (those to which a pointer was found) are not shown. ==25441== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25441== ==25441== For lists of detected and suppressed errors, rerun with: -s ==25441== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)