==26104== Memcheck, a memory error detector ==26104== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26104== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26104== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestT2SwapCellKiller -malloc_debug -malloc_dump -memory_info ==26104== Parent PID: 23945 ==26104== ==26104== ==26104== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26104== Open file descriptor 12: ==26104== at 0x10D3807D: pipe (pipe.c:29) ==26104== by 0x196F207D: ??? ==26104== by 0x14C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26104== by 0x10640418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26104== by 0x105D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26104== by 0xF2D0D38: PetscInitialize (pinit.c:924) ==26104== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26104== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26104== by 0x149A6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26104== by 0x142699: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26104== by 0x1454C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26104== by 0x145364: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26104== by 0x1459FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26104== by 0x140AB5: main (TestT2SwapCellKiller.cpp:19) ==26104== ==26104== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26104== at 0x10D3CA1C: __open_nocancel (open64_nocancel.c:39) ==26104== by 0x10CC0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26104== by 0xF17C822: ??? ==26104== by 0xF17C96F: ??? ==26104== by 0x14CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26104== by 0x14CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26104== by 0x14CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26104== by 0x14C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26104== by 0x10640418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26104== by 0x105D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26104== by 0xF2D0D38: PetscInitialize (pinit.c:924) ==26104== by 0xF1421D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26104== by 0xF142227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26104== by 0x149A6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26104== by 0x142699: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26104== by 0x1454C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26104== by 0x145364: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26104== by 0x1459FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26104== by 0x140AB5: main (TestT2SwapCellKiller.cpp:19) ==26104== ==26104== Open file descriptor 115: ==26104== ==26104== ==26104== Open file descriptor 112: ==26104== ==26104== ==26104== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestT2SwapCellKiller_valgrind.txt ==26104== ==26104== ==26104== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26104== ==26104== ==26104== ==26104== HEAP SUMMARY: ==26104== in use at exit: 618,354 bytes in 8,239 blocks ==26104== total heap usage: 77,873 allocs, 69,634 frees, 1,343,659,312 bytes allocated ==26104== ==26104== LEAK SUMMARY: ==26104== definitely lost: 0 bytes in 0 blocks ==26104== indirectly lost: 0 bytes in 0 blocks ==26104== possibly lost: 0 bytes in 0 blocks ==26104== still reachable: 56 bytes in 3 blocks ==26104== suppressed: 618,298 bytes in 8,236 blocks ==26104== Reachable blocks (those to which a pointer was found) are not shown. ==26104== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26104== ==26104== For lists of detected and suppressed errors, rerun with: -s ==26104== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)